Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rprd1aQ8VDS4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Mir874-201ENSMUST00000104769 76 ntBASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Gm11425-201ENSMUST00000119608 498 ntBASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Gm9396-201ENSMUST00000076703 567 ntBASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.53□□□□□ -0.24
Rprd1aQ8VDS4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rprd1aQ8VDS4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Rprd1aQ8VDS4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rprd1aQ8VDS4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.52□□□□□ -0.24
Rprd1aQ8VDS4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rprd1aQ8VDS4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Gm13369-201ENSMUST00000119442 987 ntBASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Gm27331-201ENSMUST00000183705 60 ntBASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Gm37922-201ENSMUST00000195596 455 ntBASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Gm29705-201ENSMUST00000212598 474 ntBASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rprd1aQ8VDS4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Gm29127-201ENSMUST00000188304 517 ntBASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Gm18062-201ENSMUST00000208020 547 ntBASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Gm18055-201ENSMUST00000208254 547 ntBASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rprd1aQ8VDS4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms