Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Gm24543-201ENSMUST00000103867 82 ntBASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc58Q8R3Q6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Gm15770-201ENSMUST00000117498 584 ntBASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Gm13365-201ENSMUST00000121188 973 ntBASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Mir6990-201ENSMUST00000183724 91 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms