Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slf1Q8R3P9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slf1Q8R3P9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Slf1Q8R3P9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.27□□□□□ -0.29
Slf1Q8R3P9 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Slf1Q8R3P9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Gm24543-201ENSMUST00000103867 82 ntBASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Gm15693-201ENSMUST00000120470 637 ntBASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Gm16476-201ENSMUST00000221544 139 ntBASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Slf1Q8R3P9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.25□□□□□ -0.29
Slf1Q8R3P9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Gm14701-201ENSMUST00000117156 348 ntBASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Gm8410-201ENSMUST00000117225 605 ntBASIC13.25□□□□□ -0.29
Slf1Q8R3P9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Gm28630-201ENSMUST00000187806 498 ntBASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms