Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Gm2546-201ENSMUST00000182630 991 ntBASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.71■□□□□ 0.27
Chmp7Q8R1T1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chmp7Q8R1T1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Gm24830-201ENSMUST00000102024 166 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Gm25890-201ENSMUST00000177643 165 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Gm22614-201ENSMUST00000178300 165 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Gm5363-201ENSMUST00000211927 938 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Gm22042-201ENSMUST00000082989 165 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Gm26232-201ENSMUST00000083360 166 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Gm24136-201ENSMUST00000083374 165 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Gm26110-201ENSMUST00000083971 165 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Gm8862-201ENSMUST00000198379 1346 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Gm4366-201ENSMUST00000201488 1342 ntBASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp7Q8R1T1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms