Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Gm12203-201ENSMUST00000118235 598 ntBASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Gm12209-201ENSMUST00000120089 596 ntBASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Gm22331-201ENSMUST00000158066 136 ntBASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Gm18187-201ENSMUST00000196476 984 ntBASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sf3a1Q8K4Z5 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Gm12390-201ENSMUST00000117897 397 ntBASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Gm24644-201ENSMUST00000157114 139 ntBASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sf3a1Q8K4Z5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Gm29649-201ENSMUST00000185649 419 ntBASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms