Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Gm5745-201ENSMUST00000183748 313 ntBASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Gm12203-201ENSMUST00000118235 598 ntBASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Gm12209-201ENSMUST00000120089 596 ntBASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Gm13123-201ENSMUST00000122173 492 ntBASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Gm6458-201ENSMUST00000211573 635 ntBASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn1Q8K0T0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Gm37922-201ENSMUST00000195596 455 ntBASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms