Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Snord83b-201ENSMUST00000104546 94 ntBASIC12.54□□□□□ -0.4
CroccQ8CJ40 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.54□□□□□ -0.4
CroccQ8CJ40 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.54□□□□□ -0.4
CroccQ8CJ40 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CroccQ8CJ40 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.53□□□□□ -0.4
CroccQ8CJ40 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Gm22121-201ENSMUST00000175148 54 ntBASIC12.53□□□□□ -0.4
CroccQ8CJ40 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.53□□□□□ -0.4
CroccQ8CJ40 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.53□□□□□ -0.4
CroccQ8CJ40 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.52□□□□□ -0.4
CroccQ8CJ40 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.52□□□□□ -0.4
CroccQ8CJ40 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CroccQ8CJ40 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Gm7287-201ENSMUST00000205267 602 ntBASIC12.52□□□□□ -0.4
CroccQ8CJ40 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.52□□□□□ -0.4
CroccQ8CJ40 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CroccQ8CJ40 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CroccQ8CJ40 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Gm28911-201ENSMUST00000188837 117 ntBASIC12.52□□□□□ -0.41
CroccQ8CJ40 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.52□□□□□ -0.41
CroccQ8CJ40 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.52□□□□□ -0.41
CroccQ8CJ40 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.52□□□□□ -0.41
CroccQ8CJ40 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CroccQ8CJ40 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CroccQ8CJ40 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms