Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.76□□□□□ -0.05
Syne4Q8CII8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Gm44100-201ENSMUST00000204329 436 ntBASIC14.76□□□□□ -0.05
Syne4Q8CII8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.76□□□□□ -0.05
Syne4Q8CII8 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.76□□□□□ -0.05
Syne4Q8CII8 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.76□□□□□ -0.05
Syne4Q8CII8 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne4Q8CII8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Syne4Q8CII8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.75□□□□□ -0.05
Syne4Q8CII8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.75□□□□□ -0.05
Syne4Q8CII8 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.75□□□□□ -0.05
Syne4Q8CII8 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.75□□□□□ -0.05
Syne4Q8CII8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syne4Q8CII8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.74□□□□□ -0.05
Syne4Q8CII8 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Gm37201-201ENSMUST00000191845 523 ntBASIC14.74□□□□□ -0.05
Syne4Q8CII8 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.74□□□□□ -0.05
Syne4Q8CII8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syne4Q8CII8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms