Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pdlim5Q8CI51 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Pdlim5Q8CI51 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pdlim5Q8CI51 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.08□□□□□ -0.47
Pdlim5Q8CI51 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Rubie-203ENSMUST00000227803 2430 ntBASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Gm15371-201ENSMUST00000117057 784 ntBASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Gm6218-201ENSMUST00000219812 628 ntBASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim5Q8CI51 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Gm28631-201ENSMUST00000190740 334 ntBASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim5Q8CI51 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.06□□□□□ -0.48
Pdlim5Q8CI51 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim5Q8CI51 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Pdlim5Q8CI51 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms