Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zc3h3Q8CHP0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Zc3h3Q8CHP0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zc3h3Q8CHP0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zc3h3Q8CHP0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zc3h3Q8CHP0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Zc3h3Q8CHP0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zc3h3Q8CHP0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zc3h3Q8CHP0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Zc3h3Q8CHP0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Gm13736-201ENSMUST00000119272 253 ntBASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Gm28071-201ENSMUST00000190355 478 ntBASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zc3h3Q8CHP0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zc3h3Q8CHP0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Zc3h3Q8CHP0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zc3h3Q8CHP0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zc3h3Q8CHP0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zc3h3Q8CHP0 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Zc3h3Q8CHP0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zc3h3Q8CHP0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Zc3h3Q8CHP0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Zc3h3Q8CHP0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Zc3h3Q8CHP0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms