Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Gm6023-201ENSMUST00000118217 606 ntBASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Gm42627-201ENSMUST00000197347 224 ntBASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rdh1Q8CGV4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Mir1247-201ENSMUST00000116706 82 ntBASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Gm3890-201ENSMUST00000182416 207 ntBASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Gm45930-201ENSMUST00000221330 292 ntBASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rdh1Q8CGV4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms