Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.22■□□□□ 0.19
Smc5Q8CG46 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.22■□□□□ 0.19
Smc5Q8CG46 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.22■□□□□ 0.19
Smc5Q8CG46 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.22■□□□□ 0.19
Smc5Q8CG46 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Mir7684-201ENSMUST00000183858 60 ntBASIC16.22■□□□□ 0.19
Smc5Q8CG46 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.22■□□□□ 0.19
Smc5Q8CG46 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.22■□□□□ 0.19
Smc5Q8CG46 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.22■□□□□ 0.19
Smc5Q8CG46 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 AC159195.1-201ENSMUST00000225867 2086 ntBASIC16.22■□□□□ 0.19
Smc5Q8CG46 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Pck2-205ENSMUST00000226352 2784 ntBASIC16.21■□□□□ 0.19
Smc5Q8CG46 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Mir686-201ENSMUST00000102174 109 ntBASIC16.21■□□□□ 0.19
Smc5Q8CG46 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Gm5354-201ENSMUST00000182417 973 ntBASIC16.21■□□□□ 0.19
Smc5Q8CG46 Gm38223-201ENSMUST00000194484 695 ntBASIC16.21■□□□□ 0.19
Smc5Q8CG46 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Gm7730-201ENSMUST00000212486 454 ntBASIC16.21■□□□□ 0.19
Smc5Q8CG46 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.21■□□□□ 0.19
Smc5Q8CG46 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc5Q8CG46 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
Smc5Q8CG46 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.2■□□□□ 0.18
Smc5Q8CG46 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc5Q8CG46 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.2■□□□□ 0.18
Smc5Q8CG46 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.2■□□□□ 0.18
Smc5Q8CG46 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc5Q8CG46 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc5Q8CG46 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.2■□□□□ 0.18
Smc5Q8CG46 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc5Q8CG46 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Zfp125-201ENSMUST00000079237 2488 ntBASIC16.2■□□□□ 0.18
Smc5Q8CG46 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc5Q8CG46 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.19■□□□□ 0.18
Smc5Q8CG46 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc5Q8CG46 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms