Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Gm42612-201ENSMUST00000197986 623 ntBASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Gm43170-201ENSMUST00000199827 612 ntBASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc87Q8CDL9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ccdc87Q8CDL9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Gm22189-201ENSMUST00000103822 86 ntBASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Gm12859-201ENSMUST00000117834 427 ntBASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Gm27772-201ENSMUST00000184900 187 ntBASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Gm17330-201ENSMUST00000221047 165 ntBASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc87Q8CDL9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms