Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Gm15198-201ENSMUST00000117283 177 ntBASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Gm38671-201ENSMUST00000200573 130 ntBASIC15.29■□□□□ 0.04
Vps53Q8CCB4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Gm10012-201ENSMUST00000078252 192 ntBASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.29■□□□□ 0.04
Vps53Q8CCB4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Gm13689-201ENSMUST00000119360 685 ntBASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.28■□□□□ 0.04
Vps53Q8CCB4 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Olfr582-201ENSMUST00000098212 960 ntBASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps53Q8CCB4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Gm12384-201ENSMUST00000119228 919 ntBASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps53Q8CCB4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps53Q8CCB4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps53Q8CCB4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps53Q8CCB4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Vps53Q8CCB4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps53Q8CCB4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps53Q8CCB4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.27■□□□□ 0.03
Vps53Q8CCB4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps53Q8CCB4 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.27■□□□□ 0.03
Vps53Q8CCB4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps53Q8CCB4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Gm13612-201ENSMUST00000119276 390 ntBASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Gm12485-201ENSMUST00000119641 291 ntBASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.26■□□□□ 0.03
Vps53Q8CCB4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.26■□□□□ 0.03
Vps53Q8CCB4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms