Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Gm29649-201ENSMUST00000185649 419 ntBASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Gm28693-202ENSMUST00000190758 331 ntBASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Gm37497-201ENSMUST00000195830 798 ntBASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Gm18187-201ENSMUST00000196476 984 ntBASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Gm18041-201ENSMUST00000218210 618 ntBASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Ccdc60Q8C4J0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc60Q8C4J0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Gm29127-201ENSMUST00000188304 517 ntBASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Gm6266-201ENSMUST00000203844 806 ntBASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc60Q8C4J0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc60Q8C4J0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms