Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.37□□□□□ -0.43
Ska3Q8C263 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.37□□□□□ -0.43
Ska3Q8C263 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Ska3Q8C263 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.37□□□□□ -0.43
Ska3Q8C263 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.37□□□□□ -0.43
Ska3Q8C263 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.37□□□□□ -0.43
Ska3Q8C263 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.36□□□□□ -0.43
Ska3Q8C263 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.36□□□□□ -0.43
Ska3Q8C263 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Gm11814-201ENSMUST00000119515 929 ntBASIC12.36□□□□□ -0.43
Ska3Q8C263 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.36□□□□□ -0.43
Ska3Q8C263 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.36□□□□□ -0.43
Ska3Q8C263 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.36□□□□□ -0.43
Ska3Q8C263 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.36□□□□□ -0.43
Ska3Q8C263 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.36□□□□□ -0.43
Ska3Q8C263 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ska3Q8C263 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ska3Q8C263 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.35□□□□□ -0.43
Ska3Q8C263 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ska3Q8C263 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.35□□□□□ -0.43
Ska3Q8C263 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ska3Q8C263 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.35□□□□□ -0.43
Ska3Q8C263 Gm8213-201ENSMUST00000118191 441 ntBASIC12.35□□□□□ -0.43
Ska3Q8C263 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.35□□□□□ -0.43
Ska3Q8C263 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.35□□□□□ -0.43
Ska3Q8C263 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Gm5745-201ENSMUST00000183748 313 ntBASIC12.35□□□□□ -0.43
Ska3Q8C263 Gm27486-201ENSMUST00000184923 80 ntBASIC12.35□□□□□ -0.43
Ska3Q8C263 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Gm5035-201ENSMUST00000215581 927 ntBASIC12.35□□□□□ -0.43
Ska3Q8C263 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ska3Q8C263 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ska3Q8C263 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ska3Q8C263 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Ska3Q8C263 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ska3Q8C263 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.34□□□□□ -0.43
Ska3Q8C263 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms