Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Gm14350-201ENSMUST00000116642 640 ntBASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sh3rf3Q8C120 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf3Q8C120 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Gm5687-201ENSMUST00000118252 640 ntBASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms