Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim47Q8C0E3 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Gm42660-201ENSMUST00000197733 947 ntBASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trim47Q8C0E3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Gm12363-201ENSMUST00000122250 668 ntBASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Gm5370-201ENSMUST00000187187 574 ntBASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Gm9899-201ENSMUST00000065519 555 ntBASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim47Q8C0E3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim47Q8C0E3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trim47Q8C0E3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Trim47Q8C0E3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.52□□□□□ -0.08
Trim47Q8C0E3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim47Q8C0E3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim47Q8C0E3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.52□□□□□ -0.08
Trim47Q8C0E3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim47Q8C0E3 Gm22018-201ENSMUST00000104357 131 ntBASIC14.52□□□□□ -0.09
Trim47Q8C0E3 Mir874-201ENSMUST00000104769 76 ntBASIC14.52□□□□□ -0.09
Trim47Q8C0E3 Gm11637-201ENSMUST00000120601 592 ntBASIC14.52□□□□□ -0.09
Trim47Q8C0E3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms