Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Gm38671-201ENSMUST00000200573 130 ntBASIC13.53□□□□□ -0.24
Trub1Q8C0D0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Gm16372-201ENSMUST00000073088 450 ntBASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trub1Q8C0D0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trub1Q8C0D0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trub1Q8C0D0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trub1Q8C0D0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trub1Q8C0D0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trub1Q8C0D0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trub1Q8C0D0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trub1Q8C0D0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trub1Q8C0D0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.52□□□□□ -0.24
Trub1Q8C0D0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trub1Q8C0D0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trub1Q8C0D0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Gm12138-201ENSMUST00000122180 951 ntBASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trub1Q8C0D0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms