Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Gm23984-201ENSMUST00000157139 203 ntBASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Gm6745-201ENSMUST00000199216 526 ntBASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trerf1Q8BXJ2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Trerf1Q8BXJ2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Gm12091-201ENSMUST00000146791 830 ntBASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Mir6392-201ENSMUST00000184924 108 ntBASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Gm44719-201ENSMUST00000206404 149 ntBASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Gm7653-201ENSMUST00000214567 508 ntBASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trerf1Q8BXJ2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.88□□□□□ -0.19
Trerf1Q8BXJ2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms