Protein–RNA interactions for Protein: Q8BV16

Zfp398, Zinc finger protein 398, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp398Q8BV16 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.19□□□□□ -0.3
Zfp398Q8BV16 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zfp398Q8BV16 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Zfp398Q8BV16 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zfp398Q8BV16 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Gm15920-201ENSMUST00000118998 402 ntBASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Gm26315-201ENSMUST00000083890 321 ntBASIC13.18□□□□□ -0.3
Zfp398Q8BV16 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.18□□□□□ -0.3
Zfp398Q8BV16 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.18□□□□□ -0.3
Zfp398Q8BV16 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zfp398Q8BV16 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Mir7023-201ENSMUST00000185093 64 ntBASIC13.17□□□□□ -0.3
Zfp398Q8BV16 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zfp398Q8BV16 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Zfp398Q8BV16 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms