Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Gm26185-201ENSMUST00000157692 266 ntBASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Snora78-201ENSMUST00000158630 128 ntBASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.42□□□□□ -0.26
Nup54Q8BTS4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup54Q8BTS4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup54Q8BTS4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms