Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rd3Q8BRE0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rd3Q8BRE0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rd3Q8BRE0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Rd3Q8BRE0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rd3Q8BRE0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Rd3Q8BRE0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Gm29199-201ENSMUST00000187766 775 ntBASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Gm37042-201ENSMUST00000193816 581 ntBASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Gm37259-201ENSMUST00000193903 849 ntBASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rd3Q8BRE0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Gm18827-201ENSMUST00000188341 790 ntBASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Gm5781-201ENSMUST00000219792 443 ntBASIC13.88□□□□□ -0.19
Rd3Q8BRE0 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Mir433-201ENSMUST00000093564 124 ntBASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Rd3Q8BRE0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Gm37466-201ENSMUST00000195692 652 ntBASIC13.87□□□□□ -0.19
Rd3Q8BRE0 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms