Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf4Q8BQZ5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Gm2495-201ENSMUST00000191160 466 ntBASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4Q8BQZ5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms