Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Gm20553-201ENSMUST00000204205 844 ntBASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Psmb5-202ENSMUST00000227257 622 ntBASIC10.8□□□□□ -0.68
Smco3Q8BQM7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco3Q8BQM7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Gm10459-201ENSMUST00000202708 1155 ntBASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.79□□□□□ -0.68
Smco3Q8BQM7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.79□□□□□ -0.68
Smco3Q8BQM7 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Matn2-203ENSMUST00000226766 3252 ntBASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms