Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Gm13616-201ENSMUST00000120600 222 ntBASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Gm15376-201ENSMUST00000122258 783 ntBASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Gm26464-201ENSMUST00000157094 305 ntBASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr3Q8BL00 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr3Q8BL00 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Gm21854-201ENSMUST00000179901 471 ntBASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms