Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Srrm4Q8BKA3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Srrm4Q8BKA3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Srrm4Q8BKA3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Gm11814-201ENSMUST00000119515 929 ntBASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Gm17150-201ENSMUST00000165577 381 ntBASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Srrm4Q8BKA3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Gm27486-201ENSMUST00000184923 80 ntBASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srrm4Q8BKA3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.37□□□□□ -0.59
Srrm4Q8BKA3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms