Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vrk1Q80X41 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vrk1Q80X41 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vrk1Q80X41 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vrk1Q80X41 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vrk1Q80X41 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.54□□□□□ -0.4
Vrk1Q80X41 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Gm26185-201ENSMUST00000157692 266 ntBASIC12.54□□□□□ -0.4
Vrk1Q80X41 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Gm8227-201ENSMUST00000223306 571 ntBASIC12.54□□□□□ -0.4
Vrk1Q80X41 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.54□□□□□ -0.4
Vrk1Q80X41 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vrk1Q80X41 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Gm15370-201ENSMUST00000117158 253 ntBASIC12.53□□□□□ -0.4
Vrk1Q80X41 Gm15236-201ENSMUST00000117309 379 ntBASIC12.53□□□□□ -0.4
Vrk1Q80X41 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.53□□□□□ -0.4
Vrk1Q80X41 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.53□□□□□ -0.4
Vrk1Q80X41 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.53□□□□□ -0.4
Vrk1Q80X41 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.53□□□□□ -0.4
Vrk1Q80X41 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.53□□□□□ -0.4
Vrk1Q80X41 Gm38158-201ENSMUST00000194617 339 ntBASIC12.53□□□□□ -0.4
Vrk1Q80X41 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.53□□□□□ -0.4
Vrk1Q80X41 Gm19163-201ENSMUST00000223313 780 ntBASIC12.53□□□□□ -0.4
Vrk1Q80X41 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.53□□□□□ -0.4
Vrk1Q80X41 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vrk1Q80X41 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vrk1Q80X41 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms