Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm24694-201ENSMUST00000180054 110 ntBASIC13.19□□□□□ -0.3
Usp8Q80U87 Gm27663-201ENSMUST00000184839 110 ntBASIC13.19□□□□□ -0.3
Usp8Q80U87 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.19□□□□□ -0.3
Usp8Q80U87 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.19□□□□□ -0.3
Usp8Q80U87 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp8Q80U87 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.19□□□□□ -0.3
Usp8Q80U87 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp8Q80U87 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Usp8Q80U87 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Usp8Q80U87 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.18□□□□□ -0.3
Usp8Q80U87 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Gm15678-201ENSMUST00000117573 960 ntBASIC13.18□□□□□ -0.3
Usp8Q80U87 Gm14719-201ENSMUST00000121891 340 ntBASIC13.18□□□□□ -0.3
Usp8Q80U87 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Usp8Q80U87 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Mir7023-201ENSMUST00000185093 64 ntBASIC13.18□□□□□ -0.3
Usp8Q80U87 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.18□□□□□ -0.3
Usp8Q80U87 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp8Q80U87 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.18□□□□□ -0.3
Usp8Q80U87 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Usp8Q80U87 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp8Q80U87 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.17□□□□□ -0.3
Usp8Q80U87 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.17□□□□□ -0.3
Usp8Q80U87 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp8Q80U87 Gm9797-201ENSMUST00000052902 613 ntBASIC13.17□□□□□ -0.3
Usp8Q80U87 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usp8Q80U87 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp8Q80U87 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp8Q80U87 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp8Q80U87 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp8Q80U87 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp8Q80U87 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp8Q80U87 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Usp8Q80U87 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp8Q80U87 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp8Q80U87 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp8Q80U87 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp8Q80U87 Mir874-201ENSMUST00000104769 76 ntBASIC13.16□□□□□ -0.3
Usp8Q80U87 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp8Q80U87 Gm12485-201ENSMUST00000119641 291 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms