Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Gm2231-201ENSMUST00000125661 612 ntBASIC12.17□□□□□ -0.46
Pif1Q80SX8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Gm29396-201ENSMUST00000185659 716 ntBASIC12.17□□□□□ -0.46
Pif1Q80SX8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Gm4857-201ENSMUST00000192718 785 ntBASIC12.17□□□□□ -0.46
Pif1Q80SX8 Gm38341-201ENSMUST00000195357 515 ntBASIC12.17□□□□□ -0.46
Pif1Q80SX8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Gm6334-201ENSMUST00000207083 228 ntBASIC12.17□□□□□ -0.46
Pif1Q80SX8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Pif1Q80SX8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.17□□□□□ -0.46
Pif1Q80SX8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pif1Q80SX8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.16□□□□□ -0.46
Pif1Q80SX8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Gm45865-201ENSMUST00000211815 945 ntBASIC12.16□□□□□ -0.46
Pif1Q80SX8 Cts7-204ENSMUST00000225321 1257 ntBASIC12.16□□□□□ -0.46
Pif1Q80SX8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.16□□□□□ -0.46
Pif1Q80SX8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pif1Q80SX8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms