Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Gm37008-201ENSMUST00000195712 319 ntBASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Gm19184-201ENSMUST00000196798 928 ntBASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh8Q7TSK3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh8Q7TSK3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh8Q7TSK3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh8Q7TSK3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh8Q7TSK3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh8Q7TSK3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.96□□□□□ -0.34
Pcdh8Q7TSK3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh8Q7TSK3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh8Q7TSK3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh8Q7TSK3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh8Q7TSK3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Gm15198-201ENSMUST00000117283 177 ntBASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh8Q7TSK3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Mir686-201ENSMUST00000102174 109 ntBASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms