Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otub1Q7TQI3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otub1Q7TQI3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Otub1Q7TQI3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otub1Q7TQI3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm12403-201ENSMUST00000121384 959 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otub1Q7TQI3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otub1Q7TQI3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otub1Q7TQI3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms