Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm12943-201ENSMUST00000119616 210 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm17208-201ENSMUST00000168388 535 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm29615-201ENSMUST00000185371 697 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm28224-201ENSMUST00000186078 697 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm29001-201ENSMUST00000186177 697 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm28292-201ENSMUST00000186593 697 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm28101-201ENSMUST00000187608 697 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm29076-201ENSMUST00000187689 697 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm28302-201ENSMUST00000187931 697 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm28646-201ENSMUST00000188220 697 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm28205-201ENSMUST00000189177 697 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm29032-201ENSMUST00000189797 697 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm28695-201ENSMUST00000190300 697 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm37448-201ENSMUST00000192795 697 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm19009-201ENSMUST00000223072 823 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.05□□□□□ -0.64
Rif1Q6PR54 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Defa-ps17-201ENSMUST00000121849 171 ntBASIC11.05□□□□□ -0.64
Rif1Q6PR54 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Gm5616-201ENSMUST00000165252 384 ntBASIC11.05□□□□□ -0.64
Rif1Q6PR54 Gm8741-201ENSMUST00000174736 384 ntBASIC11.05□□□□□ -0.64
Rif1Q6PR54 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.05□□□□□ -0.64
Rif1Q6PR54 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Gm10312-201ENSMUST00000078515 489 ntBASIC11.05□□□□□ -0.64
Rif1Q6PR54 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.05□□□□□ -0.64
Rif1Q6PR54 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.05□□□□□ -0.64
Rif1Q6PR54 Gm13937-201ENSMUST00000121000 988 ntBASIC11.05□□□□□ -0.64
Rif1Q6PR54 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms