Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Gm10051-201ENSMUST00000145209 414 ntBASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.81■□□□□ 0.28
Chd4Q6PDQ2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Gm13996-201ENSMUST00000118456 430 ntBASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Gm29787-201ENSMUST00000222129 849 ntBASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Gm10312-201ENSMUST00000078515 489 ntBASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Gm44651-201ENSMUST00000207343 372 ntBASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Chd4Q6PDQ2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Gm23699-201ENSMUST00000158835 135 ntBASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Gm8959-201ENSMUST00000213150 571 ntBASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.79■□□□□ 0.28
Chd4Q6PDQ2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Gm14267-206ENSMUST00000226870 1209 ntBASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Gm18626-201ENSMUST00000221512 1409 ntBASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms