Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Gm5687-201ENSMUST00000118252 640 ntBASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Gm17150-201ENSMUST00000165577 381 ntBASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Gm19931-201ENSMUST00000198920 368 ntBASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Gm15824-201ENSMUST00000119516 955 ntBASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc2Q6PDG5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Gm18473-201ENSMUST00000220543 868 ntBASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc2Q6PDG5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms