Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm12403-201ENSMUST00000121384 959 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm24447-201ENSMUST00000083977 338 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smarcd3Q6P9Z1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Gm5161-201ENSMUST00000075243 853 ntBASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smarcd3Q6P9Z1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms