Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Gm10434-201ENSMUST00000101158 471 ntBASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Gm27243-201ENSMUST00000183964 521 ntBASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smchd1Q6P5D8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Gm15236-201ENSMUST00000117309 379 ntBASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Gm38266-201ENSMUST00000194931 421 ntBASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Gm38092-201ENSMUST00000195600 653 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms