Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Gm12029-201ENSMUST00000120073 832 ntBASIC19.82■□□□□ 0.76
Slx4Q6P1D7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Gm27627-201ENSMUST00000183644 150 ntBASIC19.82■□□□□ 0.76
Slx4Q6P1D7 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 CT009713.8-201ENSMUST00000225448 560 ntBASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slx4Q6P1D7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Gm9025-201ENSMUST00000122415 1575 ntBASIC19.81■□□□□ 0.76
Slx4Q6P1D7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slx4Q6P1D7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Gm7851-201ENSMUST00000117574 323 ntBASIC19.8■□□□□ 0.76
Slx4Q6P1D7 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slx4Q6P1D7 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Gm5732-201ENSMUST00000182596 1007 ntBASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Gm37905-201ENSMUST00000195310 341 ntBASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms