Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf1Q69ZI1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Mir698-201ENSMUST00000102164 109 ntBASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Gm9002-201ENSMUST00000178437 499 ntBASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Mir7085-201ENSMUST00000184353 66 ntBASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Gm28911-201ENSMUST00000188837 117 ntBASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Gm5279-201ENSMUST00000199575 745 ntBASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf1Q69ZI1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Pck2-205ENSMUST00000226352 2784 ntBASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Gm27701-201ENSMUST00000184498 110 ntBASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf1Q69ZI1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms