Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a2Q64739 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.51■□□□□ 0.07
Col11a2Q64739 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.51■□□□□ 0.07
Col11a2Q64739 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.51■□□□□ 0.07
Col11a2Q64739 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Gm44980-201ENSMUST00000205826 314 ntBASIC15.51■□□□□ 0.07
Col11a2Q64739 CT030637.1-201ENSMUST00000228016 669 ntBASIC15.51■□□□□ 0.07
Col11a2Q64739 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Col11a2Q64739 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.51■□□□□ 0.07
Col11a2Q64739 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.51■□□□□ 0.07
Col11a2Q64739 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col11a2Q64739 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Gm24934-201ENSMUST00000103764 111 ntBASIC15.51■□□□□ 0.07
Col11a2Q64739 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC15.51■□□□□ 0.07
Col11a2Q64739 Gm807-202ENSMUST00000224929 408 ntBASIC15.51■□□□□ 0.07
Col11a2Q64739 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a2Q64739 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col11a2Q64739 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.5■□□□□ 0.07
Col11a2Q64739 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Col11a2Q64739 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col11a2Q64739 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.5■□□□□ 0.07
Col11a2Q64739 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Gm22133-201ENSMUST00000102082 109 ntBASIC15.5■□□□□ 0.07
Col11a2Q64739 Gm23596-201ENSMUST00000104304 132 ntBASIC15.5■□□□□ 0.07
Col11a2Q64739 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC15.5■□□□□ 0.07
Col11a2Q64739 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.5■□□□□ 0.07
Col11a2Q64739 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a2Q64739 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 AC158355.1-201ENSMUST00000215895 1705 ntBASIC15.49■□□□□ 0.07
Col11a2Q64739 Gm11509-201ENSMUST00000117358 325 ntBASIC15.49■□□□□ 0.07
Col11a2Q64739 Gm15595-201ENSMUST00000120840 961 ntBASIC15.49■□□□□ 0.07
Col11a2Q64739 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.49■□□□□ 0.07
Col11a2Q64739 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC15.49■□□□□ 0.07
Col11a2Q64739 AC174797.2-202ENSMUST00000225729 568 ntBASIC15.49■□□□□ 0.07
Col11a2Q64739 Gm5455-201ENSMUST00000058710 715 ntBASIC15.49■□□□□ 0.07
Col11a2Q64739 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.49■□□□□ 0.07
Col11a2Q64739 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Col11a2Q64739 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a2Q64739 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.49■□□□□ 0.07
Col11a2Q64739 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.48■□□□□ 0.07
Col11a2Q64739 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Gm6485-201ENSMUST00000160676 439 ntBASIC15.48■□□□□ 0.07
Col11a2Q64739 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms