Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
AtmQ62388 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.11□□□□□ -0.47
AtmQ62388 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Mir7076-201ENSMUST00000183519 74 ntBASIC12.11□□□□□ -0.47
AtmQ62388 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.11□□□□□ -0.47
AtmQ62388 Gzmn-202ENSMUST00000225535 989 ntBASIC12.11□□□□□ -0.47
AtmQ62388 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
AtmQ62388 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
AtmQ62388 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
AtmQ62388 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
AtmQ62388 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AtmQ62388 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.11□□□□□ -0.47
AtmQ62388 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.11□□□□□ -0.47
AtmQ62388 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
AtmQ62388 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.1□□□□□ -0.47
AtmQ62388 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
AtmQ62388 Gm11941-201ENSMUST00000119904 610 ntBASIC12.1□□□□□ -0.47
AtmQ62388 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 AY036118-201ENSMUST00000200021 923 ntBASIC12.1□□□□□ -0.47
AtmQ62388 Gm3619-201ENSMUST00000219947 775 ntBASIC12.1□□□□□ -0.47
AtmQ62388 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
AtmQ62388 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
AtmQ62388 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.1□□□□□ -0.47
AtmQ62388 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
AtmQ62388 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Gm18038-201ENSMUST00000197900 485 ntBASIC12.1□□□□□ -0.47
AtmQ62388 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.1□□□□□ -0.47
AtmQ62388 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.1□□□□□ -0.47
AtmQ62388 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.1□□□□□ -0.47
AtmQ62388 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
AtmQ62388 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
AtmQ62388 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
AtmQ62388 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.1□□□□□ -0.47
AtmQ62388 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AtmQ62388 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
AtmQ62388 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
AtmQ62388 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.09□□□□□ -0.47
AtmQ62388 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.09□□□□□ -0.47
AtmQ62388 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.09□□□□□ -0.47
AtmQ62388 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
AtmQ62388 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
AtmQ62388 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.09□□□□□ -0.47
AtmQ62388 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.09□□□□□ -0.47
AtmQ62388 Mir181d-201ENSMUST00000102383 72 ntBASIC12.09□□□□□ -0.47
AtmQ62388 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
AtmQ62388 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.09□□□□□ -0.47
AtmQ62388 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.09□□□□□ -0.47
AtmQ62388 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Gm19187-201ENSMUST00000206781 892 ntBASIC12.09□□□□□ -0.47
AtmQ62388 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.09□□□□□ -0.47
AtmQ62388 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
AtmQ62388 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.09□□□□□ -0.47
AtmQ62388 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.09□□□□□ -0.47
AtmQ62388 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
AtmQ62388 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.09□□□□□ -0.47
AtmQ62388 Mir7686-201ENSMUST00000200604 57 ntBASIC12.09□□□□□ -0.47
AtmQ62388 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.09□□□□□ -0.47
AtmQ62388 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
AtmQ62388 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
AtmQ62388 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms