Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.66□□□□□ -0.22
Smarcd1Q61466 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.66□□□□□ -0.22
Smarcd1Q61466 Gm43630-201ENSMUST00000201550 776 ntBASIC13.66□□□□□ -0.22
Smarcd1Q61466 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Gm9899-201ENSMUST00000065519 555 ntBASIC13.66□□□□□ -0.22
Smarcd1Q61466 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Matn2-206ENSMUST00000228570 2798 ntBASIC13.66□□□□□ -0.22
Smarcd1Q61466 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.66□□□□□ -0.22
Smarcd1Q61466 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Gm5187-201ENSMUST00000117317 991 ntBASIC13.65□□□□□ -0.22
Smarcd1Q61466 Gm13392-201ENSMUST00000117708 150 ntBASIC13.65□□□□□ -0.22
Smarcd1Q61466 Gm12363-201ENSMUST00000122250 668 ntBASIC13.65□□□□□ -0.22
Smarcd1Q61466 Gm25927-201ENSMUST00000175058 117 ntBASIC13.65□□□□□ -0.22
Smarcd1Q61466 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.65□□□□□ -0.22
Smarcd1Q61466 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.65□□□□□ -0.22
Smarcd1Q61466 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.65□□□□□ -0.22
Smarcd1Q61466 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Smarcd1Q61466 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd1Q61466 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Smarcd1Q61466 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Smarcd1Q61466 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Smarcd1Q61466 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.64□□□□□ -0.23
Smarcd1Q61466 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.64□□□□□ -0.23
Smarcd1Q61466 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Gm17208-201ENSMUST00000168388 535 ntBASIC13.64□□□□□ -0.23
Smarcd1Q61466 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.64□□□□□ -0.23
Smarcd1Q61466 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcd1Q61466 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Snora73a-201ENSMUST00000082453 205 ntBASIC13.64□□□□□ -0.23
Smarcd1Q61466 Gm10478-201ENSMUST00000084451 396 ntBASIC13.64□□□□□ -0.23
Smarcd1Q61466 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd1Q61466 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd1Q61466 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcd1Q61466 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd1Q61466 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd1Q61466 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Smarcd1Q61466 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd1Q61466 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd1Q61466 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms