Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm14704-201ENSMUST00000120300 874 ntBASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm12291-201ENSMUST00000121627 311 ntBASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm25043-201ENSMUST00000158604 212 ntBASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm18584-201ENSMUST00000203098 964 ntBASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc88aQ5SNZ0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ccdc88aQ5SNZ0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm43378-201ENSMUST00000199336 582 ntBASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc88aQ5SNZ0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms