Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm12585-201ENSMUST00000117307 290 ntBASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Mir1897-201ENSMUST00000122581 272 ntBASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Mzt1-203ENSMUST00000227948 952 ntBASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm10175-201ENSMUST00000086013 645 ntBASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms