Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Gm44158-201ENSMUST00000203881 505 ntBASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Mir181d-201ENSMUST00000102383 72 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm11979-201ENSMUST00000119629 743 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm25604-201ENSMUST00000158359 133 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm17827-201ENSMUST00000211825 742 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm14644-201ENSMUST00000116671 647 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm15036-201ENSMUST00000118880 400 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Mir1956-201ENSMUST00000157748 65 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm23771-201ENSMUST00000178702 110 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm45527-201ENSMUST00000211052 774 ntBASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps13aQ5H8C4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Gm16166-201ENSMUST00000118291 787 ntBASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Gm13022-201ENSMUST00000121181 285 ntBASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Gm22144-201ENSMUST00000157402 102 ntBASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps13aQ5H8C4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vps13aQ5H8C4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Vps13aQ5H8C4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vps13aQ5H8C4 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.65□□□□□ -0.39
Vps13aQ5H8C4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.65□□□□□ -0.39
Vps13aQ5H8C4 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.65□□□□□ -0.39
Vps13aQ5H8C4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms