Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
R3hdm4Q4VBF2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.14□□□□□ -0.15
R3hdm4Q4VBF2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
R3hdm4Q4VBF2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
R3hdm4Q4VBF2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
R3hdm4Q4VBF2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
R3hdm4Q4VBF2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
R3hdm4Q4VBF2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
R3hdm4Q4VBF2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
R3hdm4Q4VBF2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
R3hdm4Q4VBF2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Mir686-201ENSMUST00000102174 109 ntBASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Gm27682-201ENSMUST00000183930 110 ntBASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Gm40466-201ENSMUST00000212174 422 ntBASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Gm25857-201ENSMUST00000082788 129 ntBASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
R3hdm4Q4VBF2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Gm13226-201ENSMUST00000117838 404 ntBASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Gm14660-201ENSMUST00000119809 575 ntBASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.12□□□□□ -0.15
R3hdm4Q4VBF2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Gm27731-201ENSMUST00000185192 107 ntBASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
R3hdm4Q4VBF2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms