Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Gm32025-201ENSMUST00000217960 307 ntBASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Acot6-202ENSMUST00000222921 3622 ntBASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38aQ4FK66 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Snord83b-201ENSMUST00000104546 94 ntBASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Gm6023-201ENSMUST00000118217 606 ntBASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Gm22121-201ENSMUST00000175148 54 ntBASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Gm3961-201ENSMUST00000204425 994 ntBASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Gm10608-202ENSMUST00000213924 676 ntBASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38aQ4FK66 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Gm43822-201ENSMUST00000200285 476 ntBASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Gm9368-201ENSMUST00000219348 831 ntBASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms