Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.15□□□□□ -0.31
Fam196aQ3USH1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Gm13492-201ENSMUST00000119772 665 ntBASIC13.14□□□□□ -0.31
Fam196aQ3USH1 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Gm11978-201ENSMUST00000122315 466 ntBASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.14□□□□□ -0.31
Fam196aQ3USH1 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.14□□□□□ -0.31
Fam196aQ3USH1 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fam196aQ3USH1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Daam2-202ENSMUST00000224595 1926 ntBASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Gm18893-201ENSMUST00000198416 943 ntBASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Gm17812-201ENSMUST00000204935 318 ntBASIC13.13□□□□□ -0.31
Fam196aQ3USH1 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Fam196aQ3USH1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fam196aQ3USH1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms