Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim6Q3U0I6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Gm6916-202ENSMUST00000205523 195 ntBASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Gm18049-201ENSMUST00000208909 581 ntBASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Gm8227-201ENSMUST00000223306 571 ntBASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim6Q3U0I6 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim6Q3U0I6 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms