Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc4Q08624 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.57□□□□□ -0.4
Hoxc4Q08624 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Gm13316-201ENSMUST00000140537 691 ntBASIC12.57□□□□□ -0.4
Hoxc4Q08624 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Gm38341-201ENSMUST00000195357 515 ntBASIC12.57□□□□□ -0.4
Hoxc4Q08624 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.57□□□□□ -0.4
Hoxc4Q08624 Gm43758-201ENSMUST00000199500 367 ntBASIC12.57□□□□□ -0.4
Hoxc4Q08624 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.57□□□□□ -0.4
Hoxc4Q08624 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Cts7-204ENSMUST00000225321 1257 ntBASIC12.57□□□□□ -0.4
Hoxc4Q08624 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc4Q08624 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.56□□□□□ -0.4
Hoxc4Q08624 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.56□□□□□ -0.4
Hoxc4Q08624 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.56□□□□□ -0.4
Hoxc4Q08624 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Gm11964-201ENSMUST00000120982 444 ntBASIC12.56□□□□□ -0.4
Hoxc4Q08624 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.56□□□□□ -0.4
Hoxc4Q08624 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxc4Q08624 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.56□□□□□ -0.4
Hoxc4Q08624 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms